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Author |
Lakaniemi, A.-M.; Hulatt, C.J.; Thomas, D.N.; Tuovinen, O.H.; Puhakka, J.A. |

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Title |
Biogenic hydrogen and methane production from Chlorella vulgaris and Dunaliella tertiolecta biomass |
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Journal Article |
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Year |
2011 |
Publication |
Biotechnology for Biofuels |
Abbreviated Journal |
Biotechnol Biofuels |
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Volume |
4 |
Issue |
1 |
Pages |
34 |
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Abstract |
BACKGROUND: Microalgae are a promising feedstock for biofuel and bioenergy production due to their high photosynthetic efficiencies, high growth rates and no need for external organic carbon supply. In this study, utilization of Chlorella vulgaris (a fresh water microalga) and Dunaliella tertiolecta (a marine microalga) biomass was tested as a feedstock for anaerobic H2 and CH4 production. RESULTS: Anaerobic serum bottle assays were conducted at 37 degrees C with enrichment cultures derived from municipal anaerobic digester sludge. Low levels of H2 were produced by anaerobic enrichment cultures, but H2 was subsequently consumed even in the presence of 2-bromoethanesulfonic acid, an inhibitor of methanogens. Without inoculation, algal biomass still produced H2 due to the activities of satellite bacteria associated with algal cultures. CH4 was produced from both types of biomass with anaerobic enrichments. Polymerase chain reaction-denaturing gradient gel electrophoresis profiling indicated the presence of H2-producing and H2-consuming bacteria in the anaerobic enrichment cultures and the presence of H2-producing bacteria among the satellite bacteria in both sources of algal biomass. CONCLUSIONS: H2 production by the satellite bacteria was comparable from D. tertiolecta (12.6 ml H2/g volatile solids (VS)) and from C. vulgaris (10.8 ml H2/g VS), whereas CH4 production was significantly higher from C. vulgaris (286 ml/g VS) than from D. tertiolecta (24 ml/g VS). The high salinity of the D. tertiolecta slurry, prohibitive to methanogens, was the probable reason for lower CH4 production. |
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Department of Chemistry and Bioengineering, Tampere University of Technology, PO Box 541, FI-33101 Tampere, Finland. aino-maija.lakaniemi@tut.fi |
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English |
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1754-6834 |
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PMID:21943287; PMCID:PMC3193024 |
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refbase @ user @ |
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12985 |
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Author |
Raike, A.; Kortelainen, P.; Mattsson, T.; Thomas, D.N. |

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Title |
36 year trends in dissolved organic carbon export from Finnish rivers to the Baltic Sea |
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Journal Article |
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Year |
2012 |
Publication |
The Science of the Total Environment |
Abbreviated Journal |
Sci Total Environ |
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Volume |
435-436 |
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188-201 |
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Keywords |
Baltic States; Carbon/*chemistry; Finland; Hydrology; Oceans and Seas; Rivers/*chemistry; Seasons; Soil/chemistry |
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Abstract |
Increasing dissolved organic carbon (DOC) concentrations in lakes, rivers and streams in northern mid latitudes have been widely reported during the last two decades, but relatively few studies have dealt with trends in DOC export. We studied the export of DOC from Finnish rivers to the Baltic Sea between 1975 and 2010, and estimated trends in DOC fluxes (both flow normalised and non-normalised). The study encompassed the whole Finnish Baltic Sea catchment area (301,000 km(2)) covering major land use patterns in the boreal zone. Finnish rivers exported annually over 900,000 t DOC to the Baltic Sea, and the mean area specific export was 3.5 t km(-2). The highest export (7.3t km(-2)) was measured in peat dominated catchments, whereas catchments rich in lakes had the lowest export (2.2 t km(-2)). Inter-annual variation in DOC export was high and controlled mainly by hydrology. There was no overall trend in the annual water flow, although winter flow increased in northern Finland over 36 years. Despite the numerous studies showing increases in DOC concentrations in streams and rivers in the northern hemisphere, we could not find any evidence of increases in DOC export to the northern Baltic Sea from Finnish catchments since 1975. |
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Finnish Environment Institute (SYKE), P.O. Box 140, FI-00251, Helsinki, Finland. antti.raike@ymparisto.fi |
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0048-9697 |
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PMID:22854090 |
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refbase @ user @ |
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12986 |
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Lakaniemi, A.-M.; Hulatt, C.J.; Wakeman, K.D.; Thomas, D.N.; Puhakka, J.A. |

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Title |
Eukaryotic and prokaryotic microbial communities during microalgal biomass production |
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Journal Article |
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Year |
2012 |
Publication |
Bioresource Technology |
Abbreviated Journal |
Bioresour Technol |
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124 |
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387-393 |
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Bacteria/classification/genetics/metabolism; *Biomass; Electrophoresis, Polyacrylamide Gel; Eukaryotic Cells; Microalgae/*metabolism; Phylogeny; Polymerase Chain Reaction; Prokaryotic Cells |
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Eukaryotic and bacterial communities were characterized and quantified in microalgal photobioreactor cultures of freshwater Chlorella vulgaris and marine Dunaliella tertiolecta. The microalgae exhibited good growth, whilst both cultures contained diverse bacterial communities. Both cultures included Proteobacteria and Bacteroidetes, while C. vulgaris cultures also contained Actinobacteria. The bacterial genera present in the cultures were different due to different growth medium salinities and possibly different extracellular products. Bacterial community profiles were relatively stable in D. tertiolecta cultures but not in C. vulgaris cultures likely due to presence of ciliates (Colpoda sp.) in the latter. The presence of ciliates did not, however, cause decrease in total number of C. vulgaris or bacteria during 14 days of cultivation. Quantitative PCR (qPCR) reliably showed relative microalgal and bacterial cell numbers in the batch cultures with stable microbial communities, but was not effective when bacterial communities varied. Raw culture samples were successfully used as qPCR templates. |
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Department of Chemistry and Bioengineering, Tampere University of Technology, Tampere, Finland. aino-maija.lakaniemi@tut.fi |
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0960-8524 |
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PMID:22995170 |
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refbase @ user @ |
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12987 |
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Underwood, G.J.C.; Aslam, S.N.; Michel, C.; Niemi, A.; Norman, L.; Meiners, K.M.; Laybourn-Parry, J.; Paterson, H.; Thomas, D.N. |

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Title |
Broad-scale predictability of carbohydrates and exopolymers in Antarctic and Arctic sea ice |
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Journal Article |
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2013 |
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Proceedings of the National Academy of Sciences of the United States of America |
Abbreviated Journal |
Proc Natl Acad Sci U S A |
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110 |
Issue |
39 |
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15734-15739 |
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Antarctic Regions; Arctic Regions; Biopolymers/*analysis; Carbohydrates/*analysis; Ice Cover/*chemistry; Models, Chemical; Molecular Weight; Solubility; algae; biogeochemistry; global relationships; microbial |
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Sea ice can contain high concentrations of dissolved organic carbon (DOC), much of which is carbohydrate-rich extracellular polymeric substances (EPS) produced by microalgae and bacteria inhabiting the ice. Here we report the concentrations of dissolved carbohydrates (dCHO) and dissolved EPS (dEPS) in relation to algal standing stock [estimated by chlorophyll (Chl) a concentrations] in sea ice from six locations in the Southern and Arctic Oceans. Concentrations varied substantially within and between sampling sites, reflecting local ice conditions and biological content. However, combining all data revealed robust statistical relationships between dCHO concentrations and the concentrations of different dEPS fractions, Chl a, and DOC. These relationships were true for whole ice cores, bottom ice (biomass rich) sections, and colder surface ice. The distribution of dEPS was strongly correlated to algal biomass, with the highest concentrations of both dEPS and non-EPS carbohydrates in the bottom horizons of the ice. Complex EPS was more prevalent in colder surface sea ice horizons. Predictive models (validated against independent data) were derived to enable the estimation of dCHO concentrations from data on ice thickness, salinity, and vertical position in core. When Chl a data were included a higher level of prediction was obtained. The consistent patterns reflected in these relationships provide a strong basis for including estimates of regional and seasonal carbohydrate and dEPS carbon budgets in coupled physical-biogeochemical models, across different types of sea ice from both polar regions. |
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School of Biological Sciences, University of Essex, Colchester, Essex CO4 3SQ, United Kingdom |
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National Academy of Sciences |
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Washington, DC |
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English |
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English |
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0027-8424 |
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PMID:24019487; PMCID:PMC3785782 |
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refbase @ user @ |
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17491 |
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Author |
Arrigo, K.R.; Thomas, D.N. |

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Title |
Large scale importance of sea ice biology in the Southern Ocean |
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Journal Article |
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Year |
2004 |
Publication |
Antarctic Science |
Abbreviated Journal |
Antarct Sci |
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16 |
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4 |
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471-486 |
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algae; Antarctic; biogeochemistry; carbon cycle; primary production; Full Data Records |
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Despite being one of the largest biomes on earth, sea ice ecosystems have only received intensive study over the past 30 years. Sea ice is a unique habitat for assemblages of bacteria, algae, protists, and invertebrates that grow within a matrix dominated by strong gradients in temperature, salinity, nutrients, and UV and visible radiation. A suite of physiological adaptations allow these organisms to thrive in ice, where their enormous biomass makes them a fundamental component of polar ecosystems. Sea ice algae are an important energy and nutritional source for invertebrates such as juvenile krill, accounting for up to 25% of total annual primary production in ice-covered waters. The ability of ice algae to produce large amounts of UV absorbing compounds such as mycosporine-like amino acids makes them even more important to organisms like krill that can incorporate these sunscreens into their own tissues. Furthermore, the nutrient and light conditions in which sea ice algae thrive induce them to synthesize enhanced concentrations of polyunsaturated fatty acids, a vital constituent of the diet of grazing organisms, especially during winter. Finally, sea ice bacteria and algae have become the focus of biotechnology, and are being considered as proxies of possible life forms on ice-covered extraterrestrial systems. An analysis of how the balance between sea ice and pelagic production might change under a warming scenario indicates that when current levels of primary production and changes in the areas of sea ice habitats are taken into account, the expected 25% loss of sea ice over the next century would increase primary production in the Southern Ocean by approximately 10%, resulting in a slight negative feedback on climate warming. |
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Cambridge University Press |
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Cambridge |
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0954-1020 |
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Review |
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refbase @ admin @ Arrigo+Thomas2004 |
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729 |
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